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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39758800_39759594_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39758800 - 39759594

Intron Length:

795

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGTA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTAAACTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TTTTCTTAAACT

Flanking Amino Acid:

EEAKQKIADQDKVKEEKQDT

Intron Amino Acid Position:

123

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.5

0.8

84.3

26.3

Major BPS

90.7

1.01

0.7

19.9

Major PPT

68.8

0.42

0.9

67.9

36.9

Minor 5ss

-1.8

3.5

46.9

48.4

Minor BPS

79.4

1.5

95.57

31.2

Associated Gene:

Gene:

VPS13A

Ensembl Gene ID:

ENSAPLG00000005010

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032013

39749556 - 39827633

78078

ENSAPLT00000018189

39749556 - 39870985

121430