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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39759738_39761202_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

39759738 - 39761202

Intron Length:

1465

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGCACTGT

5'SS Class:

weak_major

3'SS Sequence:

ATTCTCATTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

CTTTCATTAATT

Flanking Amino Acid:

SNFVYLKIRHTSDKNWNPCL

Intron Amino Acid Position:

167

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.3

0.1

1.1

52.2

41.4

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

77.7

0.62

0.8

75.3

33.7

Minor 5ss

40.8

-1

3.4

58.6

46.6

Minor BPS

75.7

0.88

1.5

89.07

35.8

Associated Gene:

Gene:

VPS13A

Ensembl Gene ID:

ENSAPLG00000005010

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018189

39749556 - 39870985

121430

ENSAPLT00000005236

39749556 - 39870985

121430