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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39761263_39761482_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39761263 - 39761482

Intron Length:

220

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAGTAT

5'SS Class:

major

3'SS Sequence:

TGTTGTTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

GACGTATTAATA

Flanking Amino Acid:

HDETAKLFYKLVRLDNLFAY

Intron Amino Acid Position:

187

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

69.1

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

0.83

0.8

84.6

Minor 5ss

36.7

-1.5

3.6

55.1

49.1

Minor BPS

48.3

-0.1

1.7

53.69

Associated Gene:

Gene:

VPS13A

Ensembl Gene ID:

ENSAPLG00000005010

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018189

39749556 - 39870985

121430

ENSAPLT00000005236

39749556 - 39870985

121430