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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39764325_39764539_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39764325 - 39764539

Intron Length:

215

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATAAATT

5'SS Class:

major

3'SS Sequence:

TTTTTTTTCCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

AAAACAATAACA

Flanking Amino Acid:

DIAVEFNKPQYFSVMELLES

Intron Amino Acid Position:

276

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

79.6

33.3

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

89.6

0.89

0.6

84.8

Minor 5ss

44.9

-0.6

66.2

44.9

Minor BPS

-0.1

1.9

59.89

38.5

Associated Gene:

Gene:

VPS13A

Ensembl Gene ID:

ENSAPLG00000005010

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032013

39749556 - 39827633

78078

ENSAPLT00000018189

39749556 - 39870985

121430

ENSAPLT00000005236

39749556 - 39870985

121430