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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39764647_39765321_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39764647 - 39765321

Intron Length:

675

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAGGCATC

5'SS Class:

major

3'SS Sequence:

ACTGTGCTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTCAT

U12 Branch Point Sequence:

CTTCATTTGACT

Flanking Amino Acid:

DVPLHNNAKMWWKYVIYGIL

Intron Amino Acid Position:

311

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

1.1

68.8

42.2

Major BPS

78.6

0.71

79.6

32.9

Major PPT

0.29

1.1

64.4

41.2

Minor 5ss

42.7

-0.8

3.2

56.9

42.2

Minor BPS

61.3

0.44

1.5

77.51

Associated Gene:

Gene:

VPS13A

Ensembl Gene ID:

ENSAPLG00000005010

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032013

39749556 - 39827633

78078

ENSAPLT00000018189

39749556 - 39870985

121430

ENSAPLT00000005236

39749556 - 39870985

121430