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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39769429_39770143_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

39769429 - 39770143

Intron Length:

715

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTTCAAGTA

5'SS Class:

weak_major

3'SS Sequence:

TTGTGTGTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAGAT

U12 Branch Point Sequence:

TTGTGTTTAACC

Flanking Amino Acid:

KKEEQKQEVKGLEELMTLEE

Intron Amino Acid Position:

437

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.4

0.03

1.2

51.7

39.6

Major BPS

79.2

0.72

Major PPT

74.2

0.54

68.1

42.3

Minor 5ss

28.2

-2.5

3.5

30.5

Minor BPS

68.9

0.57

1.8

77.71

38.7

Associated Gene:

Gene:

VPS13A

Ensembl Gene ID:

ENSAPLG00000005010

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032013

39749556 - 39827633

78078

ENSAPLT00000018189

39749556 - 39870985

121430