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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39770239_39771034_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39770239 - 39771034

Intron Length:

796

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGATAT

5'SS Class:

major

3'SS Sequence:

CTTGTTTATCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TCTTGTTTATCT

Flanking Amino Acid:

TAVDPTLPKSYEAMKLSLNL

Intron Amino Acid Position:

467

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

71.8

34.3

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

76.6

0.6

0.9

40.6

Minor 5ss

41.8

-0.9

3.2

43.4

Minor BPS

58.2

0.34

79.06

43.7

Associated Gene:

Gene:

VPS13A

Ensembl Gene ID:

ENSAPLG00000005010

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032013

39749556 - 39827633

78078

ENSAPLT00000018189

39749556 - 39870985

121430

ENSAPLT00000005236

39749556 - 39870985

121430