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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39771178_39772738_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39771178 - 39772738

Intron Length:

1561

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGTCTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTCAT

U12 Branch Point Sequence:

TGCCACTCATCT

Flanking Amino Acid:

FTQRPGAQAIRFETKVASLE

Intron Amino Acid Position:

514

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

0.8

83.9

30.3

Major BPS

74.8

0.62

0.9

75.3

29.7

Major PPT

85.2

0.79

0.8

77.2

37.1

Minor 5ss

44.3

-0.6

3.1

64.1

47.4

Minor BPS

45.8

-0.2

63.9

45.6

Associated Gene:

Gene:

VPS13A

Ensembl Gene ID:

ENSAPLG00000005010

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032013

39749556 - 39827633

78078

ENSAPLT00000018189

39749556 - 39870985

121430

ENSAPLT00000005236

39749556 - 39870985

121430