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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39775658_39783154_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39775658 - 39783154

Intron Length:

7497

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

ACCTGTTTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

TATTTACTAACC

Flanking Amino Acid:

LEEFREKTSTGLLYVIETQK

Intron Amino Acid Position:

620

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.4

1.17

0.7

94.5

Major BPS

88.7

0.96

0.8

36.5

Major PPT

79.7

0.67

0.9

76.4

37.1

Minor 5ss

-2.9

41.3

45.2

Minor BPS

57.1

0.2

1.9

73.56

36.5

Associated Gene:

Gene:

VPS13A

Ensembl Gene ID:

ENSAPLG00000005010

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005236

39749556 - 39870985

121430

ENSAPLT00000032013

39749556 - 39827633

78078

ENSAPLT00000018189

39749556 - 39870985

121430