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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39790087_39794910_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39790087 - 39794910

Intron Length:

4824

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAACTGAG

5'SS Class:

major

3'SS Sequence:

TCTTCTATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

GTGTCTTCTATT

Flanking Amino Acid:

ESASTTSPPKAAISPVLSVP

Intron Amino Acid Position:

792

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.5

1.2

40.1

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

87.3

0.84

0.7

85.3

27.7

Minor 5ss

39.3

-1.2

3.2

48.9

41.8

Minor BPS

49.5

0.04

1.8

68.49

42.7

Associated Gene:

Gene:

VPS13A

Ensembl Gene ID:

ENSAPLG00000005010

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005236

39749556 - 39870985

121430