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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39799920_39800237_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39799920 - 39800237

Intron Length:

318

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTAAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATAAAA

U12 Branch Point Sequence:

TTTTTTTTTAAG

Flanking Amino Acid:

EVCLLCPEYMDDNGKPVYII

Intron Amino Acid Position:

930

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

79.6

34.4

Major BPS

65.3

0.38

71.6

30.1

Major PPT

88.4

0.86

0.9

94.6

18.5

Minor 5ss

36.8

-1.5

3.3

44.3

43.6

Minor BPS

56.3

0.05

1.8

67.7

39.9

Associated Gene:

Gene:

VPS13A

Ensembl Gene ID:

ENSAPLG00000005010

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032013

39749556 - 39827633

78078

ENSAPLT00000018189

39749556 - 39870985

121430

ENSAPLT00000005236

39749556 - 39870985

121430