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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39804992_39805073_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39804992 - 39805073

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAATA

5'SS Class:

strong_major

3'SS Sequence:

CAATTTTTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

TGTATGTCAATT

Flanking Amino Acid:

KHRIAEIHIEGLDSEVIMKK

Intron Amino Acid Position:

1068

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.1

1.04

0.7

89.9

22.1

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

71.5

0.48

1.1

75.4

38.1

Minor 5ss

37.1

-1.5

48.8

46.9

Minor BPS

-0.1

2.2

69.28

41.9

Associated Gene:

Gene:

VPS13A

Ensembl Gene ID:

ENSAPLG00000005010

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005236

39749556 - 39870985

121430

ENSAPLT00000032013

39749556 - 39827633

78078

ENSAPLT00000018189

39749556 - 39870985

121430