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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39817080_39818403_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39817080 - 39818403

Intron Length:

1324

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATATTTC

5'SS Class:

strong_major

3'SS Sequence:

AATCTCCTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATAAAT

U12 Branch Point Sequence:

TAAGAATTAAAA

Flanking Amino Acid:

LFKPWILEIKMKKKPKKAVV

Intron Amino Acid Position:

1778

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

77.3

31.9

Major BPS

74.5

0.61

79.6

29.1

Major PPT

78.6

0.64

0.9

74.4

35.4

Minor 5ss

50.8

0.03

2.5

69.7

41.2

Minor BPS

46.4

-0.2

1.9

57.55

40.7

Associated Gene:

Gene:

VPS13A

Ensembl Gene ID:

ENSAPLG00000005010

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032013

39749556 - 39827633

78078

ENSAPLT00000018189

39749556 - 39870985

121430

ENSAPLT00000005236

39749556 - 39870985

121430