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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39818560_39818668_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39818560 - 39818668

Intron Length:

109

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGAAAG

5'SS Class:

strong_major

3'SS Sequence:

CTTTGCTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

TGTTTTGTATCT

Flanking Amino Acid:

GLQMLSNLGTAFAEAASQTS

Intron Amino Acid Position:

1830

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

39.5

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

81.2

0.7

0.8

73.4

37.1

Minor 5ss

33.3

-1.9

2.9

41.4

44.7

Minor BPS

49.5

0.04

2.2

75.62

41.6

Associated Gene:

Gene:

VPS13A

Ensembl Gene ID:

ENSAPLG00000005010

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032013

39749556 - 39827633

78078

ENSAPLT00000018189

39749556 - 39870985

121430

ENSAPLT00000005236

39749556 - 39870985

121430