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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39820565_39822326_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39820565 - 39822326

Intron Length:

1762

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATATATC

5'SS Class:

strong_major

3'SS Sequence:

TTATTTTACGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTCCTAATG

Flanking Amino Acid:

KIITIRSPIQIRNHFSIPFN

Intron Amino Acid Position:

1971

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

0.9

80.3

32.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

76.3

0.59

0.9

74.1

35.4

Minor 5ss

45.7

-0.4

2.6

62.6

42.2

Minor BPS

67.6

0.41

1.7

75.59

36.4

Associated Gene:

Gene:

VPS13A

Ensembl Gene ID:

ENSAPLG00000005010

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032013

39749556 - 39827633

78078

ENSAPLT00000018189

39749556 - 39870985

121430

ENSAPLT00000005236

39749556 - 39870985

121430