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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39831375_39833743_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39831375 - 39833743

Intron Length:

2369

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGCAAG

5'SS Class:

strong_major

3'SS Sequence:

TACTTCATTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTAATTTAATA

Flanking Amino Acid:

TEEEIIEYGQSSLSQLEGCL

Intron Amino Acid Position:

2403

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

70.6

41.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

75.1

0.57

0.9

38.9

Minor 5ss

44.8

-0.6

2.6

56.4

Minor BPS

67.4

0.54

1.5

33.7

Associated Gene:

Gene:

VPS13A

Ensembl Gene ID:

ENSAPLG00000005010

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018189

39749556 - 39870985

121430

ENSAPLT00000005236

39749556 - 39870985

121430