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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39833874_39835696_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39833874 - 39835696

Intron Length:

1823

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTACGTCTG

5'SS Class:

major

3'SS Sequence:

TCTTGTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAA

U12 Branch Point Sequence:

TTGTTGTAAAAA

Flanking Amino Acid:

KITEEITPKEDKMEVLSLDC

Intron Amino Acid Position:

2447

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.1

66.6

44.8

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

84.7

0.78

0.7

80.6

31.5

Minor 5ss

38.5

-1.3

3.2

49.8

40.7

Minor BPS

46.2

-0.2

2.3

63.53

43.1

Associated Gene:

Gene:

VPS13A

Ensembl Gene ID:

ENSAPLG00000005010

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018189

39749556 - 39870985

121430

ENSAPLT00000005236

39749556 - 39870985

121430