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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39840018_39840733_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39840018 - 39840733

Intron Length:

716

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAATACTG

5'SS Class:

major

3'SS Sequence:

ATTTTAACAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

TTTTCTTTAATA

Flanking Amino Acid:

KIIELESNVLVCLTPNGCNM

Intron Amino Acid Position:

2577

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

1.1

43.4

Major BPS

89.7

0.98

0.7

89.9

Major PPT

66.2

0.37

61.5

38.5

Minor 5ss

35.8

-1.6

3.2

45.5

43.5

Minor BPS

1.19

0.8

91.01

22.8

Associated Gene:

Gene:

VPS13A

Ensembl Gene ID:

ENSAPLG00000005010

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018189

39749556 - 39870985

121430

ENSAPLT00000005236

39749556 - 39870985

121430