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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39840881_39841454_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39840881 - 39841454

Intron Length:

574

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TTACCCCTATTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTAACAT

U12 Branch Point Sequence:

CTGTCCTTACCC

Flanking Amino Acid:

SFRIQVYRIQIQNQIPGAIF

Intron Amino Acid Position:

2626

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.9

1.01

0.7

86.9

30.1

Major BPS

58.7

0.22

1.2

Major PPT

68.7

0.42

0.9

67.8

33.3

Minor 5ss

34.7

-1.7

3.1

49.5

46.7

Minor BPS

68.3

0.55

1.7

73.81

43.4

Associated Gene:

Gene:

VPS13A

Ensembl Gene ID:

ENSAPLG00000005010

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018189

39749556 - 39870985

121430

ENSAPLT00000005236

39749556 - 39870985

121430