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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39843621_39846395_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39843621 - 39846395

Intron Length:

2775

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGAAACC

5'SS Class:

major

3'SS Sequence:

AATGCATTCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

GTTTTTTCAAAA

Flanking Amino Acid:

TQTDVPNGQQLELFKKDVES

Intron Amino Acid Position:

2699

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.3

0.53

1.1

65.8

38.4

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

66.6

0.37

58.2

41.4

Minor 5ss

32.7

-2

3.2

43.9

43.5

Minor BPS

57.6

0.23

1.6

69.3

36.7

Associated Gene:

Gene:

VPS13A

Ensembl Gene ID:

ENSAPLG00000005010

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018189

39749556 - 39870985

121430