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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39846510_39848324_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39846510 - 39848324

Intron Length:

1815

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATAACTT

5'SS Class:

major

3'SS Sequence:

TTTTATTGTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTGTTTTTTATT

Flanking Amino Acid:

YEYFHISSIKLHLSFSLSTG

Intron Amino Acid Position:

2746

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

70.5

39.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

81.5

0.71

0.9

81.4

35.9

Minor 5ss

43.3

-0.7

3.3

65.1

46.1

Minor BPS

62.3

0.47

1.6

78.47

38.5

Associated Gene:

Gene:

VPS13A

Ensembl Gene ID:

ENSAPLG00000005010

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005236

39749556 - 39870985

121430

ENSAPLT00000018189

39749556 - 39870985

121430