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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39848471_39848584_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39848471 - 39848584

Intron Length:

114

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAGGTTAA

5'SS Class:

major

3'SS Sequence:

ATTATTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

TTTTGTTTGATT

Flanking Amino Acid:

TLTDVQDVVFKLAFFELNYH

Intron Amino Acid Position:

2794

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

73.9

32.9

Major BPS

71.2

0.53

70.3

31.9

Major PPT

83.3

0.75

0.8

81.8

35.1

Minor 5ss

39.8

-1.1

3.1

48.3

42.4

Minor BPS

67.2

0.62

1.7

86.34

34.1

Associated Gene:

Gene:

VPS13A

Ensembl Gene ID:

ENSAPLG00000005010

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018189

39749556 - 39870985

121430

ENSAPLT00000005236

39749556 - 39870985

121430