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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39848667_39849284_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39848667 - 39849284

Intron Length:

618

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGGAATA

5'SS Class:

major

3'SS Sequence:

ATTTTTATTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTACTGAATG

Flanking Amino Acid:

SAVLRHYSKQAIKQMYVLIL

Intron Amino Acid Position:

2822

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.51

1.2

72.9

38.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

84.1

0.77

0.8

82.9

32.8

Minor 5ss

-2.1

3.1

40.5

45.3

Minor BPS

65.3

0.34

1.7

73.59

38.7

Associated Gene:

Gene:

VPS13A

Ensembl Gene ID:

ENSAPLG00000005010

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005236

39749556 - 39870985

121430

ENSAPLT00000018189

39749556 - 39870985

121430