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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39849399_39849849_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39849399 - 39849849

Intron Length:

451

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAATC

5'SS Class:

strong_major

3'SS Sequence:

TCCCCTGCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTAAA

U12 Branch Point Sequence:

TTAATCTAAATG

Flanking Amino Acid:

VEAFFYEPYQGAIQGPEEFV

Intron Amino Acid Position:

2860

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

81.4

30.4

Major BPS

76.5

0.66

0.8

75.9

24.9

Major PPT

69.2

0.43

0.9

60.6

35.2

Minor 5ss

37.4

-1.4

3.2

51.9

44.9

Minor BPS

53.4

-0

1.8

60.3

41.9

Associated Gene:

Gene:

VPS13A

Ensembl Gene ID:

ENSAPLG00000005010

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018189

39749556 - 39870985

121430

ENSAPLT00000005236

39749556 - 39870985

121430