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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39849926_39850030_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39849926 - 39850030

Intron Length:

105

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAGGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTCTAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAC

U12 Branch Point Sequence:

TTTTACTTAGAT

Flanking Amino Acid:

GLKALVGGAVGGLAGAASRI

Intron Amino Acid Position:

2885

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

74.9

36.2

Major BPS

77.8

0.69

0.9

69.4

37.3

Major PPT

77.3

0.62

0.9

74.3

35.3

Minor 5ss

43.5

-0.7

3.1

57.4

41.8

Minor BPS

64.7

0.54

1.9

86.83

38.3

Associated Gene:

Gene:

VPS13A

Ensembl Gene ID:

ENSAPLG00000005010

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018189

39749556 - 39870985

121430

ENSAPLT00000005236

39749556 - 39870985

121430