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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39866096_39868760_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39866096 - 39868760

Intron Length:

2665

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATATTAA

5'SS Class:

major

3'SS Sequence:

TTATTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

AATTACCTAATT

Flanking Amino Acid:

DGRRLRIEAKERVKSVFHAK

Intron Amino Acid Position:

3105

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.7

75.3

29.9

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

0.88

0.7

89.1

27.6

Minor 5ss

-0.5

2.6

57.6

47.1

Minor BPS

58.9

0.36

1.8

77.9

37.9

Associated Gene:

Gene:

VPS13A

Ensembl Gene ID:

ENSAPLG00000005010

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018189

39749556 - 39870985

121430

ENSAPLT00000005236

39749556 - 39870985

121430