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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39868836_39870934_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39868836 - 39870934

Intron Length:

2099

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAATCA

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTCACACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCATTATTT

Flanking Amino Acid:

INFKTPEDAKWILSKLEEVR

Intron Amino Acid Position:

3130

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.75

0.9

73.8

30.8

Major BPS

100

1.24

0.5

100

Major PPT

76.6

0.6

0.8

72.2

31.5

Minor 5ss

37.6

-1.4

3.1

48.6

47.1

Minor BPS

68.3

0.65

1.8

89.23

35.4

Associated Gene:

Gene:

VPS13A

Ensembl Gene ID:

ENSAPLG00000005010

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018189

39749556 - 39870985

121430

ENSAPLT00000005236

39749556 - 39870985

121430