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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39972268_39975982_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39972268 - 39975982

Intron Length:

3715

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TCCTTATTAAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

TCTTCCTTATTA

Flanking Amino Acid:

HLVDYFPEYDGPQRDAQAAR

Intron Amino Acid Position:

292

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.2

0.97

0.8

88.9

24.9

Major BPS

77.9

0.69

0.8

75.9

Major PPT

65.7

0.35

1.1

67.8

35.8

Minor 5ss

39.5

-1.2

2.8

48.3

41.8

Minor BPS

72.7

0.71

1.5

78.93

38.2

Associated Gene:

Gene:

GNAQ

Ensembl Gene ID:

ENSAPLG00000005161

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007043

39972077 - 40097462

125386

ENSAPLT00000005350

39972077 - 40097462

125386