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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39976137_39990508_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39976137 - 39990508

Intron Length:

14372

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTATTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TCTTTTTTATTC

Flanking Amino Acid:

DQVLVESDNENRMEESKALF

Intron Amino Acid Position:

241

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.4

0.8

84.2

26.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

92.5

0.96

0.7

85.7

33.4

Minor 5ss

33.8

-1.8

2.9

42.8

44.4

Minor BPS

61.1

0.33

1.5

68.82

37.9

Associated Gene:

Gene:

GNAQ

Ensembl Gene ID:

ENSAPLG00000005161

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007043

39972077 - 40097462

125386

ENSAPLT00000005350

39972077 - 40097462

125386