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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39990639_39991621_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39990639 - 39991621

Intron Length:

983

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGAAAAA

5'SS Class:

major

3'SS Sequence:

ATTAATTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TGGATATTAATT

Flanking Amino Acid:

YPFDLQSVIFRMVDVGGQRS

Intron Amino Acid Position:

197

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

70.2

35.7

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

80.4

0.68

0.9

73.8

40.7

Minor 5ss

30.7

-2.2

3.2

39.2

46.2

Minor BPS

55.5

0.25

1.6

70.31

40.7

Associated Gene:

Gene:

GNAQ

Ensembl Gene ID:

ENSAPLG00000005161

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007043

39972077 - 40097462

125386

ENSAPLT00000005350

39972077 - 40097462

125386