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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_40053874_40066950_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

40053874 - 40066950

Intron Length:

13077

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAT|GCTTGTACA

5'SS Class:

major

3'SS Sequence:

TCAGTGACTAAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AAATCAT

U12 Branch Point Sequence:

TTGTCCTAAAAA

Flanking Amino Acid:

DEIERQSNRDYILIFCLAGT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.4

0.25

1.5

64.3

41.4

Major BPS

71.6

0.54

33.1

Major PPT

0.11

1.1

52.9

40.6

Minor 5ss

30.6

-2.2

3.6

40.4

38.3

Minor BPS

65.9

0.49

1.8

76.54

40.6

Associated Gene:

Gene:

GNAQ

Ensembl Gene ID:

ENSAPLG00000005161

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005350

39972077 - 40097462

125386