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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_40237742_40242623_F

Intron Information:

Intron Rank:

142892

Intron Class:

major

Intron Phase:

Intron Coordinates:

40237742 - 40242623

Intron Length:

4882

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGAGTGG

5'SS Class:

major

3'SS Sequence:

TTCTTTTCCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTCAT

U12 Branch Point Sequence:

TTCTTTTCCACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.4

0.43

1.1

54.6

Major BPS

84.8

0.86

85.7

34.9

Major PPT

87.3

0.84

0.6

83.5

24.9

Minor 5ss

34.1

-1.8

3.6

46.4

Minor BPS

49.3

-0

1.9

66.33

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027021

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026211

40237574 - 40243046

5473