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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_40269539_40310546_F

Intron Information:

Intron Rank:

136488

Intron Class:

major

Intron Phase:

Intron Coordinates:

40269539 - 40310546

Intron Length:

41008

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGAAAT

5'SS Class:

major

3'SS Sequence:

CTTATTCCTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TATTTCTTATTC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

1.2

80.7

33.7

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

84.1

0.77

0.8

81.4

30.5

Minor 5ss

30.6

-2.2

2.9

40.4

45.3

Minor BPS

67.6

0.53

1.5

74.95

35.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023539

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027034

40264354 - 40312688

48335