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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_40310616_40312460_F

Intron Information:

Intron Rank:

136489

Intron Class:

major

Intron Phase:

Intron Coordinates:

40310616 - 40312460

Intron Length:

1845

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATAACC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TATTTTTCAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

74.4

33.9

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

97.2

1.06

0.5

96.4

12.2

Minor 5ss

34.8

-1.7

2.9

42.5

Minor BPS

67.8

0.55

1.4

76.36

34.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023539

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027034

40264354 - 40312688

48335

ENSAPLT00000029667

40264354 - 40312688

48335