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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_4043727_4045964_R

Intron Information:

Intron Rank:

133446

Intron Class:

major

Intron Phase:

Intron Coordinates:

4043727 - 4045964

Intron Length:

2238

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGTA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTGCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAACAAT

U12 Branch Point Sequence:

TTTCTGTAACAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

0.9

77.5

32.8

Major BPS

57.4

0.18

1.3

65.4

Major PPT

79.1

0.65

0.9

77.2

37.1

Minor 5ss

29.4

-2.4

3.4

39.4

46.5

Minor BPS

39.8

-0.7

2.4

57.08

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019060

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027651

4041812 - 4046374

4563