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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_40582140_40583277_F

Intron Information:

Intron Rank:

137740

Intron Class:

major

Intron Phase:

Intron Coordinates:

40582140 - 40583277

Intron Length:

1138

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTATGTCTT

5'SS Class:

strong_major

3'SS Sequence:

CTTATTTTTGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GTTTTCTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

0.9

76.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

84.7

0.78

0.7

80.7

31.2

Minor 5ss

46.4

-0.4

2.8

64.2

41.4

Minor BPS

69.9

0.7

1.5

84.13

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024176

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021678

40581980 - 40585852

3873