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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_4063109_4063196_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4063109 - 4063196

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATTAAAA

5'SS Class:

major

3'SS Sequence:

CTTTCTGCAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

CAGCTCTTAATT

Flanking Amino Acid:

GRGRIGADGLAIWFTEEQGM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.7

0.39

64.2

Major BPS

0.92

0.9

86.2

29.1

Major PPT

69.8

0.45

0.9

66.2

34.5

Minor 5ss

39.1

-1.2

2.8

45.7

44.4

Minor BPS

63.8

0.51

1.3

69.88

41.5

Associated Gene:

Gene:

LMAN1

Ensembl Gene ID:

ENSAPLG00000010808

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011287

4062627 - 4078314

15688