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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_4066797_4068303_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4066797 - 4068303

Intron Length:

1507

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTACT

5'SS Class:

major

3'SS Sequence:

TTTGTCTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAAAAC

U12 Branch Point Sequence:

TTGTGGTTAAAA

Flanking Amino Acid:

KITYYQKTLTVLINNGFTPD

Intron Amino Acid Position:

156

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

1.1

77.8

36.6

Major BPS

60.7

0.27

1.1

67.6

34.6

Major PPT

84.7

0.78

0.8

77.7

36.7

Minor 5ss

41.3

-1

2.8

62.9

Minor BPS

48.4

-0.1

2.5

68.21

44.2

Associated Gene:

Gene:

LMAN1

Ensembl Gene ID:

ENSAPLG00000010808

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011287

4062627 - 4078314

15688