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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_4069590_4070283_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4069590 - 4070283

Intron Length:

694

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTACCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATTAT

U12 Branch Point Sequence:

TTTTTCTTACCA

Flanking Amino Acid:

KEHPDVQGQPADDPFETVND

Intron Amino Acid Position:

261

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.9

1.13

0.7

30.2

Major BPS

76.9

0.67

66.3

40.4

Major PPT

87.3

0.84

0.8

82.2

34.2

Minor 5ss

31.5

-2.1

48.7

47.5

Minor BPS

76.8

0.84

1.5

86.69

32.1

Associated Gene:

Gene:

LMAN1

Ensembl Gene ID:

ENSAPLG00000010808

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011287

4062627 - 4078314

15688