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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_4070478_4070593_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4070478 - 4070593

Intron Length:

116

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTCAA

5'SS Class:

strong_major

3'SS Sequence:

GCCCCAACACCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

TTTTTCTCACCC

Flanking Amino Acid:

GAGVPGQQVQVSQQEIDTVV

Intron Amino Acid Position:

326

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

1.1

74.1

38.3

Major BPS

0.87

0.8

85.6

Major PPT

54.7

0.11

44.8

35.3

Minor 5ss

39.1

-1.2

2.9

49.8

46.4

Minor BPS

62.9

0.38

1.8

78.1

37.8

Associated Gene:

Gene:

LMAN1

Ensembl Gene ID:

ENSAPLG00000010808

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011287

4062627 - 4078314

15688