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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_4075962_4076665_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4075962 - 4076665

Intron Length:

704

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAATTTGT

5'SS Class:

major

3'SS Sequence:

TCTTATTTCTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

CTTTTCTTATTT

Flanking Amino Acid:

DIEHLVQRNMPSSEKSKCPD

Intron Amino Acid Position:

401

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

73.4

38.1

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

81.4

0.71

0.7

80.7

30.9

Minor 5ss

42.1

-0.9

2.9

56.1

43.3

Minor BPS

68.8

0.67

1.6

82.89

39.2

Associated Gene:

Gene:

LMAN1

Ensembl Gene ID:

ENSAPLG00000010808

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011287

4062627 - 4078314

15688