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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_4076788_4078245_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4076788 - 4078245

Intron Length:

1458

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATGAA

U12 Branch Point Sequence:

ACATAATGAATT

Flanking Amino Acid:

TVLFIAYIMYRSQQEAAAKK

Intron Amino Acid Position:

441

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.15

0.6

96.2

11.9

Major BPS

67.7

0.44

38.9

Major PPT

90.8

0.92

0.7

88.9

28.1

Minor 5ss

39.3

-1.2

2.8

50.9

45.5

Minor BPS

46.8

-0.1

1.8

62.76

40.9

Associated Gene:

Gene:

LMAN1

Ensembl Gene ID:

ENSAPLG00000010808

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011287

4062627 - 4078314

15688