Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_40784413_40784951_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40784413 - 40784951

Intron Length:

539

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTGAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTGTCATTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

ATATTTTTACAC

Flanking Amino Acid:

TEEKEIAARYDSDGEKSDDN

Intron Amino Acid Position:

171

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

81.4

26.2

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

0.76

0.8

78.2

34.9

Minor 5ss

-2.1

2.7

37.8

40.1

Minor BPS

51.3

0.02

1.6

62.16

37.2

Associated Gene:

Gene:

TLE4

Ensembl Gene ID:

ENSAPLG00000004314

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004459

40701925 - 40797144

95220