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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_40791801_40792881_F

Intron Information:

Intron Rank:
13
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
40791801 - 40792881
Intron Length:
1081

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CTG|GTAGGTGAA
5'SS Class:
major
3'SS Sequence:
TCTGTCTCCACAG|A
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TCTTGAT
U12 Branch Point Sequence:
AATCTCTTGATG
Flanking Amino Acid:
KSPVSQLDCLNRDNYIRSCR
Intron Amino Acid Position:
458

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
78.6
0.67
1
70.3
35.8
Major BPS
83.8
0.84
1
73.6
41.8
Major PPT
78.2
0.64
0.8
72.3
32.5
Minor 5ss
30.7
-2.2
3.4
36.2
43.3
Minor BPS
58.3
0.12
1.3
58.56
37

Associated Gene:

Gene:
TLE4
Ensembl Gene ID:
ENSAPLG00000004314
Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000004459
40701925 - 40797144
95220