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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_40992455_40998419_R

Intron Information:

Intron Rank:

131069

Intron Class:

major

Intron Phase:

Intron Coordinates:

40992455 - 40998419

Intron Length:

5965

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGAAAA

5'SS Class:

major

3'SS Sequence:

CTTTCCTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

CAAACTTTGATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

1.1

70.3

35.4

Major BPS

0.85

0.9

39.9

Major PPT

88.5

0.87

0.7

80.6

31.4

Minor 5ss

35.7

-1.6

50.4

45.6

Minor BPS

56.4

0.28

1.3

64.85

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017724

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028316

40992293 - 41005626

13334