Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_4121284_4124189_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4121284 - 4124189

Intron Length:

2906

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTAAG

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTTTATTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATAAAT

U12 Branch Point Sequence:

TCATCTATAAAT

Flanking Amino Acid:

ETDDNSSWKDMMEYLLQVVN

Intron Amino Acid Position:

391

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

34.8

Major BPS

74.5

0.61

79.6

29.1

Major PPT

76.7

0.6

0.8

77.5

29.7

Minor 5ss

37.5

-1.4

2.8

41.7

Minor BPS

58.4

0.34

1.7

75.07

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022526

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018284

4120878 - 4126288

5411