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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_4122454_4124189_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4122454 - 4124189

Intron Length:

1736

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTAAG

5'SS Class:

strong_major

3'SS Sequence:

TGGACACAAACAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GACACAA

U12 Branch Point Sequence:

TGGACACAAACA

Flanking Amino Acid:

ETDDNSSWKDLIICSLEKME

Intron Amino Acid Position:

391

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

34.8

Major BPS

47.2

-0.1

1.1

52.9

34.1

Major PPT

0.05

1.1

44.8

40.6

Minor 5ss

37.5

-1.4

2.8

41.7

Minor BPS

42.4

-0.5

2.1

55.12

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022526

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031295

4122307 - 4126288

3982