Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_41452155_41462937_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

41452155 - 41462937

Intron Length:

10783

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACC|GTAAGTAAC

5'SS Class:

major

3'SS Sequence:

TTCCCCAAAAAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCCCAA

U12 Branch Point Sequence:

TTTCCCCAAAAA

Flanking Amino Acid:

PNLAGIPGGKPAYSFHVTAD

Intron Amino Acid Position:

444

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.3

0.5

1.3

72.7

38.8

Major BPS

50.5

0.01

1.3

60.6

37.4

Major PPT

52.7

0.06

1.1

54.1

33.2

Minor 5ss

37.9

-1.4

2.8

50.4

39.3

Minor BPS

49.8

-0

2.1

71.28

40.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012402

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012953

41446670 - 41522619

75950

ENSAPLT00000018281

41446670 - 41522619

75950