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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_41480593_41482133_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

41480593 - 41482133

Intron Length:

1541

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTGAGTTGC

5'SS Class:

major

3'SS Sequence:

ACGCTGGGAACAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATGCAT

U12 Branch Point Sequence:

ATGACGATAACG

Flanking Amino Acid:

HSLSSPEFFNQQQLQAQHLS

Intron Amino Acid Position:

143

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

71.3

35.3

Major BPS

67.2

0.43

1.4

77.7

37.1

Major PPT

49.6

-0

1.1

42.3

41.6

Minor 5ss

37.5

-1.4

2.9

48.1

41.3

Minor BPS

45.5

-0.4

2.3

55.61

45.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012402

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018281

41446670 - 41522619

75950