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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_41519748_41521242_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41519748 - 41521242

Intron Length:

1495

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

ATCTATTTTGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTAAA

U12 Branch Point Sequence:

GTTACATTAAAG

Flanking Amino Acid:

EFQFLQAQYHSLKLECEKLA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

70.2

0.5

71.6

30.1

Major PPT

78.6

0.64

0.8

73.6

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

55.8

0.04

1.8

64.19

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012402

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012953

41446670 - 41522619

75950

ENSAPLT00000018281

41446670 - 41522619

75950